CDS

Accession Number TCMCG006C35405
gbkey CDS
Protein Id XP_013750413.1
Location join(44349649..44349717,44349963..44350088,44350443..44350600,44350748..44350792,44351012..44351090,44351182..44351255,44351429..44351535,44351623..44351796,44351993..44352196,44352296..44352494,44352570..44352644,44352728..44353041,44353333..44353519,44353605..44353845,44353947..44354286,44354503..44354683,44354766..44354906,44355006..44355255,44355347..44355784,44355880..44356340,44356421..44356557,44356645..44356826,44356899..44357285,44357465..44357590,44357850..44357915,44358000..44359614,44359617..44359728,44359804..44360095,44360259..44360483,44360633..44361166,44361253..44361385,44361475..44361737)
Gene LOC106452786
GeneID 106452786
Organism Brassica napus

Protein

Length 2645aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013894959.2
Definition LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 20-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category V
Description Down-regulated in metastasis
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACCCCAGCTGATGCTCGGGCAGTCAAGTCGCTCAACACTTCCGGGGGACGTAAGAAATTCGTGTTCAAGAATCTCGCTCAGAAAGTCAATGAGATTGACATCAGCGGTTTCTTTAAGAGCCTGGAGAAGGTTAAACCTGAGCCTTCAGAGGGTTCTTCGTTTTTCAGAGACTGTCTCGTTGAATTGAGGGAACTGAATACAGCAGAAGATTTCATTTCGTTTTATGAAGAAATGTTGCCATTTGTTCAGACTTTGCCTTTGGTCATTGAGCAAAAAGAAATAATCTTCACCAAGCTTGTCTCTCGATTACAAATGGACGCAAGATTGTCCCTGGACGCCATTCTCAGGTTGATTGCTGCTTTATCAAGAGATCTCTTGGAGGACTTTATCCCCTTCCTTCCACGGATCGTGAACTCCTTAGTGGCACTCCTAGAAAATGCTGCCAAGAAAGACGCGGATATTATCAAGCAGATATTCTCTTCATGGTGCGAGATATTAATGAATCTGCAGAAGTATCTCGTACGCGACATCGAAGGTATTCTCAGGGATACGTTGGACTTGAGGTATCATCCTAAAGACTATATCAATGAATTAATGTCAGAGTCTATGTCCTTTTTGTTGAGGAATGCGCGGAATGAGCAACTTGAAAAAGGGATCAACAGGATCCTTTCCGAAGTTGCAGATCCAGCCAAACAAGATGGAGCAGTTGATTTACTTTATTATGCTATGAGAGGAACCTCTGGAAGTCTCCACTCAAAAGCCGGGAGAGTTTTGAGTTTCTTGCTGAAAGATTCAACATTATCTTTTTGTGATAATTCTCCTCAAGGCCCTGGTACAGTCGTGGAAGTTGTTAGTTCCACTTTGGAGAGATTATGCGAGGATTTGGAAGCAGACAAATTAAATGTTATGTGGAAATGCTTGATTCAAGAAATAAATGAATCGATCAAAAACAAAAACTCCGTTCATTTAAGCCGACTGTTGAGTGTGCTTACTGCAGCTGTCAGGGTTCAGAAAGGTCTCAAGGTTCATGATTACCCATCTTTGATTCGACTTGTGGGCCTCACTGTCTCAACTTTTGTGGCTTCCTCTGAGACCGTTGTAGAAGGGGATAACTTATCTGCTGTCATTGATGAAGTTCTACAACTGATGTTAAGCACAATAAACAGAGTCACTGATTTGGAAACTGTTGCTTCGCAATGGGCTCCCATTTTTGCCATGAAGAGTTCAAGTTTGCTGACTTTTTTGGAGGAGTTGTTGAACAAGGATCAATCCGTAGTGAAAGCCTTTACAAACAATATATTAAGTGCAATTAACAATATGATTTGGGAGTCTCCTGAGGAAGTTATTCCTCTGTTACTGACATTTTGCGAGAACCAACAAACAAGTCACGACAGAGTGATCATCGTAGATCAAACATTTGAGAGAATTCATAAGTTTTTGGAAGAAAAGATTAAGAAGGTTCGGCAGAATGTAGAGAACACTGGATTATCTCAAGCTGATGATGCCGAGTTGGCTGCCATCTGGGGAGTTGTCAACTGTTATCCTTATTTCAAAGTGGATCCATCATTACTGATTTCCTTTAAGGATACTCTCAGACAGTATTTGACAGTGTCGGATGCAAACACGTTTAGTACCCCAGAATTGAAGTGGCAGAGCTTACTTGGTGCTGCTTTAAGTTCATGTCACAAACTGCCGAGAAGAATCAACCACAACGATATAGAGGAAGCGTTGTCTATGGCAAAAGATTACAAGTCATGCGTACAAGTGTTGACCCCCGTGGCCGATTTTTTGGACTCAATGCACAGGCTTGCATTAGCTAATGATGACAGTTCTAAGCCGCAACCAGAACTTCAAGAAGAAAAGGCTAAAGATGCTTTTGGCATATTTTCGGAAAATCTGCGCCACCCAAACAAATGCATCCGTCTTATGACGCTGAGGATTTTGTGCCATTTTGAGACATTTTCGTCCGACTCGTCTTTTGAAGAGCATCCTCCCAAGAAGAAAATGAAAACTGAGGAGACCAAAAAACCCCTTCATAAAAGGAATGTTCTTGAGTTATTACGCTCAATCCAAGAGATTGTTCCCACAGTGAATACGGAGGGGGAGTTGATCAGTATGATTCATGAAATAAAAAGGAATCTCTCTGCTGGCTTGGTACATGCGGCATATTTGCAGCTAGTATTGAATGGGCTGATGGGAATATTTCATATTAGTTATACTAAGCTGTGGGGTCCAGCATCTGAGTGTCTTGAGGTTCTTCTGAGGAATCACACAGTAGCTGTGTGGAGTGATTTTGTTTGCTATTTGGACCAGTGCCAGCTAAAATCTGAGAAACTCGACAATCATAGTGAGAATCCGAACCACAACTTGTCAGAGAGGCCTACCGATCTGATTGGCCGTTTTAATTTATTTCTCTATCCGCCGTCTAATAGCACAGCTACTGCAACGGTGGCTACGCAGTTGCTCCAGACCTTGCAGAAAGCTCCCAAAGTTGCTCAGTCCCGTGCTTCTGAGATTCTCCCTCGGTTGCTGAAGTTTCTGGGATACAACATTGAAAATCCTACGAGTGTCGGATTGTTCAATGCGCCAGTTTGTAAAGGAGATGACTGGAGGAATGTTCTTAAACAGTGGTTGACTTTGCTGAAATTGATGAAAAATCCTAAGTCGTTTCAGTTTAGCGAATTTCTAAACAACGTTCTGCAGAATAGATTCCTGGACGATAATGATACTGAACTACAAACCATTGTTCTAGAGTGCCTTCTGTTGTCGAACGACTTCTTACTCCCACACCGCGAGCATTTGTTGAAACTGATCAAACCAGAGGAATTAAGAGAAGAACTCACAACCTCGAACATGTCCGTAGACATTGAAGAAGCTCACAAATCTCTTCTTTTCTCTCTTGAAATTCGCATCCTTGCGCCAAAAGTCAGGACATTAAAGAATTTGGCTTCACGGAAGCATACAAGTATAAATCATAGGAAGGCAGTTCTTCGCTTTATAGCTGAGCGGGATGTTAACGACCTTTCCCTCTTCTTTGTATTGTTGATAAAGCCTTTGAACATCATATCAGAGGAAACAATGGACTTGTTCTGGAGTTCAGGCAAAGCTTCGCTGGATTATTTCCAAAAGGCGGATTTCTTGAAGGATTTCACTGGTGATACTATTTCTACATTATCCAAGAATCAGAAATCTGGGTTTCTTCATGTCATCCAAGACATCCTTGAAGTCTTTGATGAGCTCCGTGTCCGACCTTTTATAGACTTTTTGATGGGATGTGTTGTCCGGCTAATGGTAAACTATGAAGAAAGAAACATTGCATCATTGACACCAAGAAATGACACTGCCGCCTCATCAACACCAGACAATAAACAGAATGTTTCAGTTCATCAAGACCAGGCTGGCACTGCTTTGAAGCAGTTTAAAGAGTTGAGATCCTTGTGTCTGAAAATTATTGCTCATGTTCTTGATAAATACGAGGATTCTGATATTGGTTCCGAGTTCTGGAACCTCTTCTTTTCGGCAGTAAATCCGTTAATCAAGAATTTCAAGCAGGAGGGTTCTAGTAGTGAGAAAACAAGTTCCTTGTTCTCATGCTTCTTGTCAATGAGCAGAAACCGCAATCTCGTGACCCTCTTATGTCGGGAAGAGTCTCTTATTCCAGACATTTGTTCGATTCTGACAGTCACCACAGCTTCAGACGCTATAAAGTCGTCTGCACTGAAGTTCATAGAGAATCTGCTTTGTCTTGACAGTGAGTTGCATGAGGATGACAGTATGATCAAAGGCTTCTTAGATCCGTACGTAGAAACACTGTTCAGCAGCTTGCATTCTCTTTTCATCGGGGATATTAACAAAAGGAAATCAGTCAAGTATCATGGGGAAAGAGAGGTTAGGATTCTTAAATTGTTGTCAAAGCACATGGGAGATCAGTCTTGTGCTATGAAGTATTTGGAAGTCTTACTTTCTTTCTTGGATAAAAACGTGAAAGATTCTGATATCCGTCGTGAAGCTTTACTAGCTATTCAGGACATCATATCGTTGCTTGGGACTGAGAGTGTCACCAAAATTATAAACAAAGTCTCTCCTCTACTTGTTGACGCTGAAGTTGACGTTAGATTGTGCATTTGTGATCTTCTTGAATCTCTTGCAAAAATCGACTTTTCTCTGGATGATGTGGCAAAGCGCATCCGAGATATGAATTCCATCTCAGCCATGGAAGTTGATGACCTTGACTATGAAAGGATAGCTAATGCTTATGTGGAGATTGACTCGGATTTCTTTGCTAAATCCTCGAAGCAGCACACGATGATTATACTGTCACAAAGTTTATACAACTTATCATCGGAATCCATTATGATAAGGGGAAGCGCACATAAGCTCTTGTCATCTTTCATTGAATTTTCGGCCTCAATACTATGCCAAGAAGCTTCAGCTCACTCTGGCGTTGGCAAAGAGGTCAAAATAGCTGATGCAAGCTGGACAGGAAAGCATACACTGTCCATTGTTGATTTTATCTTGAAACACATTGCTGATGCAATAAGCAGAGGAGGCAATATAGTGAAGGAGTGGATTCTTTTGATACGTGAAATGGTGACAAAACTCCCAGATGCCGGAGATCTTGGTGCATTTAGACCTTTATGCTCTGAAGATGAGAATCTTGATTTTTTTAAATCTATTATTCACATTCAGTCACACCGTAGATCAAAGGCGATTTCACGCTTCGCAAAACTGGTCGGAGATAGCAGCCTGCCTGAGGGAGTCTTGAGAAAACTGTTTGTCGCAGTCTTTTTCCACATGTTGCTCGATGGACAAGATGTAAAAGAAAAAGAGAACAATGTCCGTAATGCATGCACAGAGGCCCTTGCATCTGTATCGGCACATATGAGTTGGAAGTCGTACTATGCTCTATTGAATCGGTGTTTCCGTGAGATGCACAATCATACCAAAAAGGGAAAGCTTCTGCTGCGGCTTATCTGCTTGATTTTGGATAAATTTCATTTTACAGAAGATGGTGGTTACAGGCAAGAGGAGATTGAGGGGATTCATAAAAGCCTTCAAACTGTGTTTGGAAAGATGCAGAAGCTGATGGATTCTGAGTCTGATAATGTTAATGTTAACAGCAGTGTAGCTGCGCTGAAGGTTCTAAAGCTGCTCCCCAAAGACGTAATGGACGATTATCTGTCCCCTATAATTAAGAGGATTGCCACTTTTACGAAGAACCGGTTGGAGAGCACACGTGATGAAGCCAGATCTGCTCTGGTTGCTTGTTTGAAGGAATTGGGGCTCGAGTACTTGCAGGTTGTCATCAAAAGTTTACGTGATATCCTGAAACGAGGATCTGAGTTGCATGTGCTGGGATACACCGTCCATTCTATCTTATCGAAGTGCTTGTCCAAACCTACGTGTGGGAAGTTGGATCATTGTTTGGATGATCTCCTTGCTGTGGTGGAAAACGACATCTTTGGCGAGGTTGCTGAACAGAAAGATGTGGACAAATTCAAATCCAAAATGAAAGAGACAAGAAAACGCATGTCATTCGAGAGTCTGAAGTTGATTTGTGAAAATGTGACGTTCAGAGAGCATGCATTGAAACTACTTTCCCCGGTCACTTCTCAGCTGCGACGGCATTTAACTCCAAAGATAAAATCAAATCTGGAGAAGATGTTACAACAAATTGCAGTTGGTATTGAAGGCAATCCATCTGTTGACCAAGTAGATCTGTTTGTTTTTATATATGGCCGCGTTGACGACGGTATTAACAACAGGAATGGTCCTGGAGATCAAGGGTCTTCTCCGCCATCCCAAAAGAAAGGGAAATCAAGAGATCGACAAGAGACTGCTGGGTTGATTTCTGGTACTAGGTCTTGTCCACATCTTATAACAGTGTTTGCTCTGGACTTACTGCAAAACAGACTGAAGAAAATCAAACTCGACAACACTGATAAACAGCTGCTGGGGAAGTTGGATTCATTTGTCAAACTACTTACGGAATGCTTGCGTTCTAAGTATGAAGAGATTGTGTCATCAGCCCTTAGATGTTTCACTTCATTAATATGGTTTCCACTGCCTTCCCTCATTTCTGAAGCAGATGAGTTGAAAACAGCATTGTTAACAATTGCTCAGTCTGCAGTGAATTCCAGCAGTCCTCTTGTGCAGTCATGCCTTAAGCTATTAACAACGCTTCTCGGTAATAAAAACATTACTTTGTCTCCGGAGCAGCTAAAGTTGGTGATTCAGTTCCCCATGTTTGTTGATCTGGAGTCCGATCCATCCTTTGTTAACCTTTCACTACTCAAGGCCATTGTGAAACGAAACCTTGTGGTTCCAGAGATTTATGACGTTGCAGTTCAGGTTTCAGAGTTGTTGGTAAAGGAATCAATCCGCAAGAAATGCAAACAGATACTGTTACAGTTTTTGGTCCACTACACACTTTCTGAGAAACGTTTACAGCAACATGTGGAATTTCTGCTGCAAAATCTGAAGTATGAACATCCAAGTGGAAGAGAAGCAGTCCTTGACATGCTTCATACTCTAATCTTGAAATTCTCAGTACCAAATCTCGGCAAGAAGTCATTTCTTGACCAACAGTCGAAAACAATGTTCATTCAGCTTGCTATGTGTTTGGGCAATGATATTGATCAAAAAGTCCTGCCCCGGATCGGTTCTGTGATAGAACTTCTGATAGGGTGCATCAGTGAAGATCAAGTTGGTACCATTCTATCGTATTGTCTGTGTTGGTATAAGCAGCAAAGGTTACAGGCTGTGGCAGCACAGGTGTTGGGATTTATTATTGACTCCATGGAGAAATCATTTCGGAAGCATATCCACAATACATTGGAGGATGCCAAAGTGATAATGAAGTCTGCTGTCAGTGCTTCCAGCCTGCATAATGCCGAGGAAGGTGTTATTCCGTTCTGGAAGGAAGCATACTACTCACTCGTTATGATAGAGAAGATGGTCCGGCAATTTCCTGATTTAAAACTCAAAGAAGATTTAGAGGATATATGGAAAATGGTATTTAAGTTCTTGTTGTACCCACACGCATGGTTGCGAAGTATATCACGCCGGCTACTGAATTATTATTTCAAGGCATTGGCTAGGAGGAAAAGAGCAGAATCTCAGATAGTAGTATCTGATTCTCTTCTTGAGAACCCAAGTAGCCTGTTCTCGGTTGCTGTTTCTCTTTGCTCCCAGTTAAAGGAGCTACCCACCACTGGAGATGTTAACGTCGATCTCCTCGTAGAAAATATTGTTTTCGCGGTCTCGAGTCTTCATTCCCTGATTGGACATTCTGTTCAAGCAAAAGACAATGGGTTCTGGTCCGGTCTTGGCGAGGATGAGCAAGTGGTGTTCCTAAAAGCCTTTGAAGTGCTTGATTCAGGGAAAGGAAGGTCTACTTTTCTGTCTCTTACCTCAGGCAAACGTACTGAGAACGGCGAGGAGGATGATGCTGCGAGTGGTGTAAGGAATGTATTGATTGGAAGCTTGCTCAAGAGGCTCGGGAAGGTTGCTCTTGATACGGAGTCTGTTCAGATGAAGATTGTGTTCAACGTCTACAAAGCATTCACCTCACAGATGAATCAAGATGACTGTCGTTTATATGCCTTCAAAATTCTGCTTCCATTGTACAAAGTCTGTGAAGGTTTCACAGGAAAGATCATCTCAGATGAGTCTAAACAACTAGCAGAGGAGGTACGTGACAGTATAAGAGACAAGACATTAGGCAACCAACTCTTTGTGGAGGTGTACAGTGAGATAAGGAAAAGCTTGAGAAACAAGAGGGAGAAGAGAAAGAGAGAAGAAAAGACAATGGCAGTGGTGAATCCAGAGAGAAATGCAAAGAGGAAACTGAGGTTAGCTTCAAAGAACAAAGCCAACAAGAGGAGGAGGATGACTAGCATGAAGTTATCTAGATGGGCTCGCTCTTGA
Protein:  
MATPADARAVKSLNTSGGRKKFVFKNLAQKVNEIDISGFFKSLEKVKPEPSEGSSFFRDCLVELRELNTAEDFISFYEEMLPFVQTLPLVIEQKEIIFTKLVSRLQMDARLSLDAILRLIAALSRDLLEDFIPFLPRIVNSLVALLENAAKKDADIIKQIFSSWCEILMNLQKYLVRDIEGILRDTLDLRYHPKDYINELMSESMSFLLRNARNEQLEKGINRILSEVADPAKQDGAVDLLYYAMRGTSGSLHSKAGRVLSFLLKDSTLSFCDNSPQGPGTVVEVVSSTLERLCEDLEADKLNVMWKCLIQEINESIKNKNSVHLSRLLSVLTAAVRVQKGLKVHDYPSLIRLVGLTVSTFVASSETVVEGDNLSAVIDEVLQLMLSTINRVTDLETVASQWAPIFAMKSSSLLTFLEELLNKDQSVVKAFTNNILSAINNMIWESPEEVIPLLLTFCENQQTSHDRVIIVDQTFERIHKFLEEKIKKVRQNVENTGLSQADDAELAAIWGVVNCYPYFKVDPSLLISFKDTLRQYLTVSDANTFSTPELKWQSLLGAALSSCHKLPRRINHNDIEEALSMAKDYKSCVQVLTPVADFLDSMHRLALANDDSSKPQPELQEEKAKDAFGIFSENLRHPNKCIRLMTLRILCHFETFSSDSSFEEHPPKKKMKTEETKKPLHKRNVLELLRSIQEIVPTVNTEGELISMIHEIKRNLSAGLVHAAYLQLVLNGLMGIFHISYTKLWGPASECLEVLLRNHTVAVWSDFVCYLDQCQLKSEKLDNHSENPNHNLSERPTDLIGRFNLFLYPPSNSTATATVATQLLQTLQKAPKVAQSRASEILPRLLKFLGYNIENPTSVGLFNAPVCKGDDWRNVLKQWLTLLKLMKNPKSFQFSEFLNNVLQNRFLDDNDTELQTIVLECLLLSNDFLLPHREHLLKLIKPEELREELTTSNMSVDIEEAHKSLLFSLEIRILAPKVRTLKNLASRKHTSINHRKAVLRFIAERDVNDLSLFFVLLIKPLNIISEETMDLFWSSGKASLDYFQKADFLKDFTGDTISTLSKNQKSGFLHVIQDILEVFDELRVRPFIDFLMGCVVRLMVNYEERNIASLTPRNDTAASSTPDNKQNVSVHQDQAGTALKQFKELRSLCLKIIAHVLDKYEDSDIGSEFWNLFFSAVNPLIKNFKQEGSSSEKTSSLFSCFLSMSRNRNLVTLLCREESLIPDICSILTVTTASDAIKSSALKFIENLLCLDSELHEDDSMIKGFLDPYVETLFSSLHSLFIGDINKRKSVKYHGEREVRILKLLSKHMGDQSCAMKYLEVLLSFLDKNVKDSDIRREALLAIQDIISLLGTESVTKIINKVSPLLVDAEVDVRLCICDLLESLAKIDFSLDDVAKRIRDMNSISAMEVDDLDYERIANAYVEIDSDFFAKSSKQHTMIILSQSLYNLSSESIMIRGSAHKLLSSFIEFSASILCQEASAHSGVGKEVKIADASWTGKHTLSIVDFILKHIADAISRGGNIVKEWILLIREMVTKLPDAGDLGAFRPLCSEDENLDFFKSIIHIQSHRRSKAISRFAKLVGDSSLPEGVLRKLFVAVFFHMLLDGQDVKEKENNVRNACTEALASVSAHMSWKSYYALLNRCFREMHNHTKKGKLLLRLICLILDKFHFTEDGGYRQEEIEGIHKSLQTVFGKMQKLMDSESDNVNVNSSVAALKVLKLLPKDVMDDYLSPIIKRIATFTKNRLESTRDEARSALVACLKELGLEYLQVVIKSLRDILKRGSELHVLGYTVHSILSKCLSKPTCGKLDHCLDDLLAVVENDIFGEVAEQKDVDKFKSKMKETRKRMSFESLKLICENVTFREHALKLLSPVTSQLRRHLTPKIKSNLEKMLQQIAVGIEGNPSVDQVDLFVFIYGRVDDGINNRNGPGDQGSSPPSQKKGKSRDRQETAGLISGTRSCPHLITVFALDLLQNRLKKIKLDNTDKQLLGKLDSFVKLLTECLRSKYEEIVSSALRCFTSLIWFPLPSLISEADELKTALLTIAQSAVNSSSPLVQSCLKLLTTLLGNKNITLSPEQLKLVIQFPMFVDLESDPSFVNLSLLKAIVKRNLVVPEIYDVAVQVSELLVNXESIRKKCKQILLQFLVHYTLSEKRLQQHVEFLLQNLKYEHPSGREAVLDMLHTLILKFSVPNLGKKSFLDQQSKTMFIQLAMCLGNDIDQKVLPRIGSVIELLIGCISEDQVGTILSYCLCWYKQQRLQAVAAQVLGFIIDSMEKSFRKHIHNTLEDAKVIMKSAVSASSLHNAEEGVIPFWKEAYYSLVMIEKMVRQFPDLKLKEDLEDIWKMVFKFLLYPHAWLRSISRRLLNYYFKALARRKRAESQIVVSDSLLENPSSLFSVAVSLCSQLKELPTTGDVNVDLLVENIVFAVSSLHSLIGHSVQAKDNGFWSGLGEDEQVVFLKAFEVLDSGKGRSTFLSLTSGKRTENGEEDDAASGVRNVLIGSLLKRLGKVALDTESVQMKIVFNVYKAFTSQMNQDDCRLYAFKILLPLYKVCEGFTGKIISDESKQLAEEVRDSIRDKTLGNQLFVEVYSEIRKSLRNKREKRKREEKTMAVVNPERNAKRKLRLASKNKANKRRRMTSMKLSRWARS